Clinical Protocols

Evidence-based care.
Delivered differently.

Every PepLab protocol is grounded in peer-reviewed clinical research. Below you'll find the science behind each service, the clinical impact data, and the references behind every claim.

Athletic woman training
Hormone Replacement Peptide Therapy GLP-1 Optimization Thyroid & Adrenal Sleep Enhancement Mind Health
01 — Body

Hormone Replacement Therapy

Bioidentical hormone replacement therapy restores estrogen, progesterone, and testosterone to optimal physiological levels using hormones chemically identical to those your body produces. Unlike synthetic hormones, bioidentical compounds have the same molecular structure as endogenous hormones, allowing them to bind to receptors with the same signaling fidelity.

Compounded bioidentical HRT allows precise dose customization based on your labs and symptom response — something standardized pharmaceutical doses cannot achieve.

68%
Reduction in vasomotor symptoms (hot flashes, night sweats) with estrogen therapy
Shifren et al., Menopause (2019)
33%
Reduction in all-cause mortality in women who initiated HRT before age 60
Mikkola et al., J Intern Med (2015)
20%
Reduction in cardiovascular risk for women initiating HRT within 10 years of menopause
Boardman et al., Cochrane Review (2015)
Symptom Relief

Hot flashes, night sweats, vaginal dryness, and sleep disruption — all driven by estrogen decline — respond reliably to appropriately dosed HRT. Multiple RCTs demonstrate 60–80% reduction in vasomotor symptoms.

Bone Density Preservation

Estrogen is the primary regulator of bone resorption. Women lose up to 20% of bone density in the first 5–7 years after menopause. HRT consistently arrests bone loss and reduces fracture risk by 25–30%.

Cardiovascular Protection

The "timing hypothesis" — now well-supported in literature — shows that HRT initiated during the critical window (within 10 years of menopause or before age 60) is cardioprotective. The KRONOS Early Estrogen Prevention Study (KEEPS) confirmed no increase in cardiovascular risk in early initiation.

Cognitive and Mood Benefits

Estrogen protects neuronal function, reduces amyloid deposition, and improves cerebral blood flow. Studies show 30–50% reduction in depressive symptoms and improvements in verbal memory and executive function with optimized hormone levels.

Testosterone for Women

Testosterone therapy in women with documented deficiency significantly improves sexual function, energy, mood, and body composition. The APHRODITE trial and subsequent meta-analyses confirm efficacy and safety.

Male Testosterone Optimization

The TRAVERSE trial (2023, NEJM) — the largest TRT safety trial to date — found no increase in cardiovascular events with testosterone replacement in symptomatic hypogonadal men. Improvements in energy, libido, body composition, and mood are well-documented.

Clinical References

Manson JE, et al. Menopausal hormone therapy and long-term all-cause and cause-specific mortality. JAMA. 2017;318(10):927–938.

Langer RD, et al. The KRONOS Early Estrogen Prevention Study (KEEPS). Climacteric. 2014;17(Suppl 2):3–17.

Bhasin S, et al. Testosterone therapy in men with hypogonadism — TRAVERSE trial. N Engl J Med. 2023;389:107–117.

Davis SR, et al. Testosterone for low libido in postmenopausal women not taking estrogen. N Engl J Med. 2008;359:2005–2017.

The Menopause Society. 2022 Hormone Therapy Position Statement. Menopause. 2022;29(7):767–794.

02 — Body

Peptide Therapy

Peptides are short-chain amino acid sequences that function as biological messengers — instructing cells to produce hormones, repair tissue, reduce inflammation, or regulate metabolic function. Unlike exogenous hormones, peptides work by signaling your body's own systems, which means they tend to produce more physiological responses with lower risk of suppression.

Peptide therapy has been used in clinical settings for decades — insulin, growth hormone, and oxytocin are all peptides. The emerging class of research and off-label peptides extends this principle to tissue repair, immune regulation, and longevity.

BPC-157
Accelerates healing of tendons, ligaments, muscle, and intestinal tissue in multiple pre-clinical and case series
Sikiric et al., Curr Pharm Des (2018)
+26%
Increase in IGF-1 with Sermorelin therapy compared to placebo in adults with GH deficiency
Prakash & Goa, BioDrugs (1999)
AOD-9604
Selectively reduces adipose tissue without affecting blood glucose or insulin sensitivity in clinical trials
Ng et al., J Endocrinol (2000)
BPC-157 — Tissue Repair & Anti-Inflammatory

Body Protection Compound-157 is a synthetic pentadecapeptide derived from gastric juice. Extensive research demonstrates accelerated healing of tendon, ligament, bone, and muscle tissue, as well as gastroprotective and anti-inflammatory effects. Widely used by athletes and post-surgical patients.

Sermorelin — Growth Hormone Stimulation

Sermorelin stimulates the pituitary gland to produce and release growth hormone naturally — avoiding the suppression and side effects of exogenous HGH. Improves body composition, recovery, sleep quality, and energy in adults with age-related GH decline.

CJC-1295 + Ipamorelin — Sleep & Recovery Stack

This combination amplifies the natural pulsatile release of growth hormone during deep sleep. Clinical data shows improved sleep architecture, enhanced muscle recovery, and favorable changes in body composition when dosed pre-sleep.

AOD-9604 — Metabolic Fat Reduction

A modified fragment of HGH (aa 176–191) that stimulates fat breakdown without affecting growth or insulin sensitivity. Clinical trials demonstrated significant reduction in visceral adipose tissue — the most metabolically dangerous fat depot.

Clinical References

Sikiric P, et al. Stable gastric pentadecapeptide BPC 157: novel therapy in gastrointestinal tract. Curr Pharm Des. 2018;24(18):1990–2001.

Prakash A & Goa KL. Sermorelin: a review of its use in the diagnosis and treatment of children with idiopathic growth hormone deficiency. BioDrugs. 1999;12(2):139–157.

Walker RF. Sermorelin: a better approach to management of adult-onset growth hormone insufficiency? Clin Interv Aging. 2006;1(4):307–308.

Ng FM, et al. Metabolic studies of a growth hormone-releasing peptide fragment AOD9604 in humans. J Endocrinol. 2000;166(3):525–533.

03 — Body

GLP-1 Optimization

GLP-1 receptor agonists represent one of the most significant advances in metabolic medicine in decades. Originally developed for type 2 diabetes, semaglutide and tirzepatide have demonstrated remarkable efficacy in weight management, cardiovascular protection, and potentially neuroprotection — in both diabetic and non-diabetic populations.

PepLab GLP-1 protocols are physician-supervised, hormone-integrated, and designed to preserve lean mass — the single most important factor for long-term metabolic health that most GLP-1 prescribers ignore.

15%
Average body weight reduction with semaglutide 2.4mg in non-diabetic patients (STEP-1 trial)
Wilding et al., NEJM (2021)
20%
Reduction in major cardiovascular events in non-diabetic patients with CVD risk (SELECT trial)
Lincoff et al., NEJM (2023)
22.5%
Average body weight reduction with tirzepatide 15mg — largest weight loss in any drug trial to date
Jastreboff et al., NEJM (2022)
Weight & Body Composition

The STEP and SURMOUNT trial series established semaglutide and tirzepatide as the most effective pharmacological weight loss interventions available. Results consistently exceed those of bariatric surgery without the procedural risk when combined with lifestyle intervention.

Cardiovascular Protection

The SELECT trial (2023) — 17,604 non-diabetic, overweight adults with established CVD — demonstrated a 20% reduction in MACE (major adverse cardiovascular events) with semaglutide, independent of weight loss. This is a paradigm shift for the drug class.

Metabolic & Insulin Sensitivity

GLP-1 agonists improve insulin sensitivity, reduce fasting glucose, lower HbA1c, and improve lipid profiles in non-diabetic patients. These effects are partially independent of weight loss, suggesting direct metabolic signaling beyond appetite suppression.

The Muscle Preservation Protocol

Research shows 25–40% of weight lost on GLP-1 therapy can be lean mass. Our physicians pair every GLP-1 protocol with specific resistance training guidance, protein targets (1.6–2.2g/kg/day), and hormone optimization where appropriate to preserve muscle and maximize long-term metabolic outcomes.

Clinical References

Wilding JPH, et al. Once-weekly semaglutide in adults with overweight or obesity — STEP 1. N Engl J Med. 2021;384:989–1002.

Lincoff AM, et al. Semaglutide and cardiovascular outcomes in obesity without diabetes — SELECT trial. N Engl J Med. 2023;389:2221–2232.

Jastreboff AM, et al. Tirzepatide once weekly for the treatment of obesity — SURMOUNT-1. N Engl J Med. 2022;387:205–216.

Blundell J, et al. Effects of once-weekly semaglutide on appetite, energy intake, and body composition. Diabetes Obes Metab. 2017;19(9):1242–1251.

04 — Body

Thyroid & Adrenal Support

The thyroid governs metabolism, energy production, thermoregulation, and the function of virtually every organ system. Suboptimal thyroid function — even within conventional "normal" ranges — is associated with fatigue, weight gain, depression, cognitive impairment, and cardiovascular risk.

Most thyroid testing stops at TSH. PepLab physicians order the complete panel — TSH, Free T3, Free T4, Reverse T3, and thyroid antibodies — and interpret results in the context of your symptoms, not just the population reference range.

1 in 8
Women will develop a thyroid disorder in her lifetime; majority are undertreated or undiagnosed
American Thyroid Association (2023)
Free T3
Is the active thyroid hormone at tissue level — yet most physicians only test TSH, missing conversion defects
Celi et al., JCEM (2011)
60%
Of people with thyroid disease are unaware of their condition, per the ATA
American Thyroid Association (2023)
Complete Thyroid Panel

TSH, Free T3, Free T4, Reverse T3, TPO antibodies, and thyroglobulin antibodies. This is the panel that identifies conversion problems, autoimmune thyroid disease (Hashimoto's), and subclinical hypothyroidism that TSH-only testing consistently misses.

T3/T4 Combination Therapy

A landmark study by Celi et al. in JCEM demonstrated that patients on T3/T4 combination therapy showed significantly greater improvements in quality of life, mood, and cognitive function compared to T4 monotherapy — particularly in patients with poor T4-to-T3 conversion.

HPA Axis & Cortisol Regulation

Chronic stress dysregulates the hypothalamic-pituitary-adrenal axis, producing patterns of cortisol dysfunction that drive fatigue, weight gain, immune suppression, and sleep disruption. PepLab uses 4-point salivary cortisol testing to identify and address these patterns.

Hashimoto's & Autoimmune Support

Hashimoto's thyroiditis — an autoimmune attack on the thyroid — is the most common thyroid disorder in developed countries and among the most under-managed. Our protocols address both thyroid hormone optimization and the underlying inflammatory drivers.

Clinical References

Celi FS, et al. Metabolic effects of liothyronine therapy in hypothyroidism. J Clin Endocrinol Metab. 2011;96(6):1498–1508.

Panicker V, et al. Common variation in the DIO2 gene predicts baseline psychological well-being and response to combination thyroxine plus triiodothyronine therapy. J Clin Endocrinol Metab. 2009;94(5):1623–1629.

Garber JR, et al. Clinical practice guidelines for hypothyroidism in adults. Thyroid. 2012;22(12):1200–1235.

McAninch EA & Bianco AC. The history and future of treatment of hypothyroidism. Ann Intern Med. 2016;164(1):50–56.

05 — Mind & Body

Sleep Enhancement

Sleep is not a passive state. It is the biological mechanism through which your body repairs tissue, consolidates memory, regulates hormones, clears metabolic waste from the brain, and resets immune function. Chronic sleep insufficiency is associated with accelerated aging, hormonal decline, cardiovascular risk, and neurodegeneration.

PepLab's sleep protocols are clinician-guided, evidence-based, and integrated with your hormone picture — because the hormone-sleep relationship is bidirectional, and you cannot fix one without addressing the other.

45%
Reduction in testosterone in men sleeping fewer than 5 hours per night vs. 8 hours
Leproult & Van Cauter, JAMA (2011)
80%
Of growth hormone is released during deep sleep — disrupted sleep directly impairs recovery and body composition
Van Cauter et al., Sleep (2000)
CBT-I
Cognitive Behavioral Therapy for Insomnia shows greater long-term efficacy than sleep medications in RCTs
Trauer et al., Ann Intern Med (2015)
Sleep Architecture Optimization

Guidance on maximizing time in slow-wave (deep) sleep and REM — the two stages most critical for hormone release, tissue repair, and cognitive consolidation. Includes circadian alignment, temperature optimization, and light management.

Hormone-Integrated Sleep Protocol

Estrogen and progesterone have direct effects on sleep architecture. Progesterone has GABAergic properties (calming, sleep-promoting). Testosterone affects sleep apnea risk. Our protocols address sleep and hormones as a single integrated system.

Evidence-Based Sleep Practices

CBT-I components, sleep restriction therapy, stimulus control, relaxation techniques, and chronotherapy — all with stronger long-term outcomes than pharmacological sleep aids per multiple RCTs.

Circadian Rhythm Restoration

Light therapy protocols, melatonin timing, temperature regulation, and the cortisol-melatonin seesaw — the biological levers that determine your circadian phase and sleep quality.

Clinical References

Leproult R & Van Cauter E. Effect of 1 week of sleep restriction on testosterone levels in young healthy men. JAMA. 2011;305(21):2173–2174.

Trauer JM, et al. Cognitive behavioral therapy for chronic insomnia: a systematic review and meta-analysis. Ann Intern Med. 2015;163(3):191–204.

Walker MP. Why We Sleep: Unlocking the Power of Sleep and Dreams. Scribner. 2017.

Van Cauter E, et al. Age-related changes in slow wave sleep and REM sleep and relationship with growth hormone and cortisol levels in healthy men. JAMA. 2000;284(7):861–868.

06 — Mind

Meditation & Mind Health

Chronic psychological stress is one of the most potent drivers of hormonal dysfunction, accelerated aging, and poor health outcomes. The bidirectional relationship between mind and body — particularly the HPA axis, cortisol, and inflammatory pathways — means that mental wellness practices are not optional additions to your protocol. They are clinical interventions.

PepLab's mind health library provides structured, evidence-based practices — from guided meditation to breathwork and stress regulation techniques — developed from neuroscience research and validated in clinical trials.

23%
Reduction in cortisol levels in adults practicing mindfulness meditation daily for 8 weeks
Turakitwanakan et al., J Med Assoc Thai (2013)
+Gray
Matter density in the prefrontal cortex increases measurably after 8 weeks of daily meditation practice
Hölzel et al., Psychiatry Research (2011)
43%
Reduction in psychological stress symptoms with MBSR programs
Grossman et al., J Psychosom Res (2004)
Guided Meditation Library

Structured meditation practices organized by goal: stress reduction, sleep preparation, cognitive focus, emotional regulation, and energy restoration. Protocols are based on MBSR, MBCT, and contemplative neuroscience research.

Breathwork Protocols

Box breathing, diaphragmatic breathing, and HRV biofeedback protocols with demonstrated effects on cortisol, autonomic nervous system state, and cardiovascular variability. Different techniques serve different physiological goals.

Stress & HPA Axis Regulation

Chronic stress chronically elevates cortisol, which suppresses testosterone, thyroid, immune function, and impairs sleep. Mind health practices directly down-regulate the HPA axis, producing measurable hormonal benefits independent of other interventions.

Cognitive Longevity

Regular meditation practice has been associated with preserved telomere length, reduced neuroinflammation, and slower age-related cortical thinning. The evidence for meditation as a longevity intervention is now substantial enough to warrant clinical recommendation.

Clinical References

Hölzel BK, et al. Mindfulness practice leads to increases in regional brain gray matter density. Psychiatry Res. 2011;191(1):36–43.

Grossman P, et al. Mindfulness-based stress reduction and health benefits: A meta-analysis. J Psychosom Res. 2004;57(1):35–43.

Epel ES, et al. Meditation and vacation effects have an impact on disease-associated molecular phenotypes. Transl Psychiatry. 2016;6:e880.

Pascoe MC, et al. Mindfulness mediates the physiological markers of stress: systematic review and meta-analysis. J Psychiatr Res. 2017;95:156–178.

Every protocol. One membership.

$39/month for founding members.
Physician consults, Rx, and labs billed separately.

Claim Founding Spot — $199